megahit
Metagenome assembler using succinct de Bruijn graph approach with CUDA
homepage ↗homepage ↗ github: voutcn/megahit
Available in
| Overlay | Newest | Ebuilds | Last activity | |
|---|---|---|---|---|
| science gitweb ↗ | 1.2.9 | 1 | 4 d | details › |
Versions & arches
Use flags of 1.2.9
- +openmp Build support for the OpenMP (support parallel computing), requires >=sys-devel/gcc-4.2 built with USE="openmp"
- cuda Enable NVIDIA GTX680 (4G memory) and Tesla K40c (12G memory) with CUDA 5.5, 6.0 and 6.5