BoBaFor-0.0.9pypi

download

# automatically generated by g-sorcery
# please do not edit this file

EAPI=8

REALNAME="${PN}"
LITERALNAME="${PN}"
REALVERSION="${PV}"
DIGEST_SOURCES="yes"
PYTHON_COMPAT=( python{3_11,3_12,3_13,3_14} )
DISTUTILS_USE_PEP517=standalone

inherit python-r1 gs-pypi

DESCRIPTION="A machine learning approach for conducting genome wide association studies (GWAS) on bacteria"

HOMEPAGE="https://github.com/PaulDanPhillips/BoBaFor"
LICENSE="MIT"
SRC_URI="https://files.pythonhosted.org/packages/9e/c4/ac833bb8270531ec64a61f502da9c6755e9fe0935439b3be8cf2c399be89/bobafor-${REALVERSION}.tar.gz"
SOURCEFILE="bobafor-${REALVERSION}.tar.gz"
RESTRICT="test"

SLOT="0"
KEYWORDS="~amd64 ~x86"

IUSE=""
DEPENDENCIES="dev-python/pandas[${PYTHON_USEDEP}]
	dev-python/scipy[${PYTHON_USEDEP}]
	dev-python/statsmodels[${PYTHON_USEDEP}]
	~dev-python/numpy-1.23.5[${PYTHON_USEDEP}]
	dev-python/scikit-learn[${PYTHON_USEDEP}]
	dev-python/xgboost[${PYTHON_USEDEP}]
	dev-python/matplotlib[${PYTHON_USEDEP}]
	dev-python/snakemake[${PYTHON_USEDEP}]
	dev-python/Boruta[${PYTHON_USEDEP}]
	dev-python/shap[${PYTHON_USEDEP}]
	dev-python/seaborn[${PYTHON_USEDEP}]
	dev-python/plotnine[${PYTHON_USEDEP}]
	dev-python/pytest[${PYTHON_USEDEP}]"
BDEPEND="${DEPENDENCIES}"
RDEPEND="${DEPENDENCIES}"