protcur-9999tgbugs-overlay
download
# Copyright 2019-2020 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
DISTUTILS_USE_PEP517=setuptools
PYTHON_COMPAT=( pypy3 pypy3_11 python3_{10..14} )
inherit distutils-r1
if [[ ${PV} == "9999" ]]; then
EGIT_REPO_URI="https://github.com/tgbugs/protc.git"
inherit git-r3
KEYWORDS=""
BDEPEND="dev-python/orthauth"
else
inherit pypi
KEYWORDS="~amd64 ~x86"
fi
DESCRIPTION="Web annotation workflows for protocol curation."
HOMEPAGE="https://github.com/tgbugs/protc/tree/master/protcur"
LICENSE="MIT"
SLOT="0"
IUSE="dev test"
RESTRICT="!test? ( test )"
BDEPEND="${BDEPEND}
dev-python/fastentrypoints[${PYTHON_USEDEP}]"
IDEPEND="
acct-user/protcur
acct-group/protcur
"
RDEPEND="
dev-python/flask[${PYTHON_USEDEP}]
dev-python/htmlfn[${PYTHON_USEDEP}]
>=dev-python/hyputils-0.0.10[${PYTHON_USEDEP}]
dev-python/markdown[${PYTHON_USEDEP}]
>=dev-python/pyontutils-0.1.36[${PYTHON_USEDEP}]
>=dev-python/pysercomb-0.0.13[${PYTHON_USEDEP}]
dev? (
dev-python/pytest-cov[${PYTHON_USEDEP}]
dev-python/wheel[${PYTHON_USEDEP}]
)
test? (
dev-python/pytest[${PYTHON_USEDEP}]
)
"
distutils_enable_tests pytest
if [[ ${PV} == "9999" ]]; then
S="${S}/${PN}"
src_configure () { DISTUTILS_ARGS=( --release ); }
src_prepare () {
sed -i '1 i\import fastentrypoints' setup.py
# replace package version to keep python quiet
sed -i "s/__version__.\+$/__version__ = '9999.0.0+$(git rev-parse --short HEAD)'/" ${PN}/__init__.py
default
}
else
src_prepare () {
sed -i '1 i\import fastentrypoints' setup.py
default
}
fi
python_test() {
esetup.py install_data
PYTHONWARNINGS=ignore pytest -v --color=yes || die "Tests fail with ${EPYTHON}"
}
python_install_all() {
local DOCS=( README* )
distutils-r1_python_install_all
}
src_install() {
keepdir "/var/log/${PN}"
fowners ${PN}:${PN} "/var/log/${PN}"
newinitd "${S}/resources/protcur.rc" protcur
newconfd "${S}/resources/protcur.confd" protcur
chmod 0600 "${D}"/etc/conf.d/*
distutils-r1_src_install
}
pkg_postinst() {
ewarn "In order to run protcur you need to set the hypothes.is"
ewarn "group, user, and api token in /etc/conf.d/protcur"
}