Apocrypha

SigProfilerTopography

SigProfilerTopography provides topography analyses for substitutions, dinucleotides and indels for all given samples.

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Available in

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pypi GitHub ↗ 1.0.108 1 5 mo details ›

Versions & arches

VersionOverlay amd64x86 Committed
1.0.108 pypi amd64 testing x86 testing — view · download · history ↗

Use flags of 1.0.108

4 expansion flags (python targets, ABIs, cpu flags…)
  • python_targets_python3_11
  • python_targets_python3_12
  • python_targets_python3_13
  • python_targets_python3_14

Runtime dependencies of 1.0.108

show 26 lines
dev-python/SigProfilerMatrixGenerator[python_targets_python3_11(-)?,python_targets_python3_12(-)?,python_targets_python3_13(-)?,python_targets_python3_14(-)?]
dev-python/SigProfilerSimulator[python_targets_python3_11(-)?,python_targets_python3_12(-)?,python_targets_python3_13(-)?,python_targets_python3_14(-)?]
dev-python/SigProfilerAssignment[python_targets_python3_11(-)?,python_targets_python3_12(-)?,python_targets_python3_13(-)?,python_targets_python3_14(-)?]
>=dev-python/xlsxwriter-1.3.7[python_targets_python3_11(-)?,python_targets_python3_12(-)?,python_targets_python3_13(-)?,python_targets_python3_14(-)?]
>=dev-python/numpy-2.0.0[python_targets_python3_11(-)?,python_targets_python3_12(-)?,python_targets_python3_13(-)?,python_targets_python3_14(-)?]
>=dev-python/pandas-2.0.0[python_targets_python3_11(-)?,python_targets_python3_12(-)?,python_targets_python3_13(-)?,python_targets_python3_14(-)?]
>=dev-python/matplotlib-3.4.3[python_targets_python3_11(-)?,python_targets_python3_12(-)?,python_targets_python3_13(-)?,python_targets_python3_14(-)?]
>=dev-python/scipy-1.1.0[python_targets_python3_11(-)?,python_targets_python3_12(-)?,python_targets_python3_13(-)?,python_targets_python3_14(-)?]
>=dev-python/statsmodels-0.9.0[python_targets_python3_11(-)?,python_targets_python3_12(-)?,python_targets_python3_13(-)?,python_targets_python3_14(-)?]
dev-python/fastrand[python_targets_python3_11(-)?,python_targets_python3_12(-)?,python_targets_python3_13(-)?,python_targets_python3_14(-)?]
>=dev-python/psutil-5.6.3[python_targets_python3_11(-)?,python_targets_python3_12(-)?,python_targets_python3_13(-)?,python_targets_python3_14(-)?]
dev-python/pyranges[python_targets_python3_11(-)?,python_targets_python3_12(-)?,python_targets_python3_13(-)?,python_targets_python3_14(-)?]
>=dev-python/intervaltree-3.1.0[python_targets_python3_11(-)?,python_targets_python3_12(-)?,python_targets_python3_13(-)?,python_targets_python3_14(-)?]
dev-python/pyBigWig[python_targets_python3_11(-)?,python_targets_python3_12(-)?,python_targets_python3_13(-)?,python_targets_python3_14(-)?]
python_targets_python3_11? (
dev-lang/python:3.11
)
python_targets_python3_12? (
dev-lang/python:3.12
)
python_targets_python3_13? (
dev-lang/python:3.13
)
python_targets_python3_14? (
dev-lang/python:3.14
)